Functional Analysis (with Interactions) for Dense SNP Data

Documentation for package ‘FunctanSNP’ version 0.1.0

coefSNPreg	Extract coefficients from an SNPlm or SNPinter object
plotGVF	Plot the genetic variant function
plotRawdata	Visualization of the sequence (genotypes) data
plotSNPreg	Plot coefficient functions and residuals from an SNPlm or SNPinter object
predictSNPreg	Make predictions from an SNPlm or SNPinter object
simData1	Generate simulated data for 'SNPlm'
simData2	Generate simulated data for 'SNPinter' and 'SNPcvinter'
simX	Generate the sequence (genotypes) data containing only 0, 1 and 2
SNPcvinter	Cross-validation for 'SNPinter'
SNPgvf	Transform the sequence (genotypes) data into the genetic variant function
SNPinter	Revised partially functional interaction regression analysis for the sequence (genotypes) data
SNPlm	Revised functional linear regression analysis for the sequence (genotypes) data