Transcriptomic Dynamics Models in Field Conditions

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Documentation for package ‘FIT’ version 0.0.6

• DESCRIPTION file.
• User guides, package vignettes and other documentation.

Help Pages

FIT-package	FIT: a statistical modeling tool for transcriptome dynamics under fluctuating field conditions
convert.attribute	Converts attribute data from a dataframe into an object.
convert.expression	converts expression data from a dataframe into an object.
convert.weather	Converts weather data from a dataframe into an object.
convert.weight	Converts regression weight data from a dataframe into an object.
FIT	FIT: a statistical modeling tool for transcriptome dynamics under fluctuating field conditions
fit.models	A raw API for fixing linear regression coefficients.
init	A raw API for initializing model parameters.
load.attribute	Loads attribute data.
load.expression	Loads expression data.
load.weather	Loads weather data.
load.weight	Loads regression weight data.
make.recipe	Creates a recipe for training models.
make.trivial.weights	Makes trivial weight data
optim	A raw API for optimizing model parameters.
predict	Predicts gene expressions using pretrained models.
prediction.errors	Computes the prediction errors using the trained models.
train	Constructs models following a recipe.
weather.entries	Supported weather factors.