LM22 {FARDEEP}

Siganature matrix

Description

A dataset containing 547 genes and 22 TILs.

Usage

LM22

Format

A data frame with 547 rows and 22 variables:

B.cells.naive

naive B cells

B.cells.memory

memory B cells

Plasma.cells

Plasma cells

T.cells.CD8

CD8 T cells

T.cells.CD4.naive

naive CD4 T cells

T.cells.CD4.memory.resting

resting memory CD4 T cells

T.cells.CD4.memory.activated

activated memory CD4 T cells

T.cells.follicular.helper

follicular helper T cells

T.cells.regulatory.Tregs.

regulatory T cells

T.cells.gamma.delta

gamma delta T cells

NK.cells.resting

resting natural killer cells

NK.cells.activated

activated natural killer cells

Monocytes

monocytes

Macrophages.M0

M0 macrophages

Macrophages.M1

M1 macrophages

Macrophages.M2

M2 macrophages

Dendritic.cells.resting

resting dendritic cells

Dendritic.cells.activated

activated dendritic cells

Mast.cells.resting

resting mast cells

Mast.cells.activated

activated mast cells

Eosinophils

eosinophils

Neutrophils

neutrophils

References

Aaron M. Newman, Chih Long Liu, Michael R. Green, Andrew J. Gentles, Weiguo Feng, Yue Xu, Chuong D. Hoang, Maximilian Diehn and Ash A. Alizadeh. Robust enumeration of cell subsets from tissue expression profiles.