plot_binet_ggplot2 {ExplodeLayout}

Plot bipartite network given node list (label, coordinates, shape, color) and incidence matrix.

Description

Plot bipartite network given node list (label, coordinates, shape, color) and incidence matrix.

Usage

plot_binet_ggplot2(nodelist, incidence_matrix, plotlabel = "c")

Arguments

nodelist

A dataframe of at least 5 columns: Label, X, Y, Color, baseShape.

incidence_matrix

A matrix where row names and column names are the node ID of a bipartite network. An element of the i-th row and j-th column of the matrix is 0 if node on row i is not connected to node on column j, and edge weight if they are connected.

plotlabel

A string indicating whether to add node label text. 'r' for rows, 'c' for columns, and 'rc' for both rows and columns of the incidence_matrix. All other strings will be ignored. Default to 'c'.

Value

a ggplot2 object p which can be shown using print(p).

Examples

exploded_nodelist=get_explode_nodelist(example_nodelist,radius=1.2)
p=plot_binet_ggplot2(exploded_nodelist,example_incidmat)
print(p)