EpiDynamics-package |
The EpiDynamics Package |
MultiStrainPartialImmunity |
Partial immunity model that cycles (P 4.2). |
PlotMods |
Plot results of capm model functions |
SEIR |
SEIR model (2.6). |
SEIR4AgeClasses |
SEIR model with 4 age classes and yearly aging (P 3.4). |
SEIRnStages |
SEIR model with n stages (P 3.5). |
SIR |
Simple SIR model (P 2.1). |
sir2AgeClasses |
SIR model with 2 age classes (P 3.3). |
SIR2Stages |
SIR model with 2 age classes (P 3.3). |
SIR2TypesImports |
SIR model with two types of imports (P 6.6). |
SIRAdditiveNoise |
SIR model with constant additive noise (P 6.1). |
SIRBirthDeath |
SIR model with births and deaths (P 2.2). |
SIRCarrierState |
SIR model with carrier state (2.7). |
SIRDemogStoch |
SIR model with demographic stochasticity (P 6.4). |
SIRInducedMortality |
SIR model with disease induced mortality: Density-dependent transmission (P 2.3). |
SIRInducedMortality2 |
SIR model with disease induced mortality: frequency-dependent transmission (P 2.4). |
SIRPartialImmunity |
SIR model with partial immunity (P 4.1). |
SIRScaledAdditiveNoise |
SIR model with Scaled additive noise (P 6.2). |
SIRSinusoidalBirth |
SIR model with sinusoidal births (P 5.3). |
SIRSinusoidalForcing |
SIR model with sinusoidal forcing (P 5.1). |
SIRTauLeap |
SIR model with tau leap method (P 6.5). |
SIRTermTimeForcing |
SIR model with corrected term-time forcing (P 5.2). |
SIRVector |
SIR model for mosquito vectors (P 4.4). |
SIS |
Simple SIS model (P 2.5). |
SIS2RiskGroups |
SIS model with 2 risk groups (P 3.1). |
SISDemogStoch |
SIS model with demographic stochasticity (P 6.3). |
SISinusoidalTransmBrith |
Rabbit Hemorrhagic Disease model with sinusoidal transmission rate and per capita birth rate (P 5.4). |
SISnRiskGroups |
SIS model with multiple risk groups (P 3.2). |
SISPairwiseApprox |
Pairwise SIS approximation model (P 7.8). |