Dynamic Models in Epidemiology

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Documentation for package ‘EpiDynamics’ version 0.3.1

• DESCRIPTION file.
• Package NEWS.

Help Pages

EpiDynamics-package	The EpiDynamics Package
MultiStrainPartialImmunity	Partial immunity model that cycles (P 4.2).
PlotMods	Plot results of capm model functions
SEIR	SEIR model (2.6).
SEIR4AgeClasses	SEIR model with 4 age classes and yearly aging (P 3.4).
SEIRnStages	SEIR model with n stages (P 3.5).
SIR	Simple SIR model (P 2.1).
sir2AgeClasses	SIR model with 2 age classes (P 3.3).
SIR2Stages	SIR model with 2 age classes (P 3.3).
SIR2TypesImports	SIR model with two types of imports (P 6.6).
SIRAdditiveNoise	SIR model with constant additive noise (P 6.1).
SIRBirthDeath	SIR model with births and deaths (P 2.2).
SIRCarrierState	SIR model with carrier state (2.7).
SIRDemogStoch	SIR model with demographic stochasticity (P 6.4).
SIRInducedMortality	SIR model with disease induced mortality: Density-dependent transmission (P 2.3).
SIRInducedMortality2	SIR model with disease induced mortality: frequency-dependent transmission (P 2.4).
SIRPartialImmunity	SIR model with partial immunity (P 4.1).
SIRScaledAdditiveNoise	SIR model with Scaled additive noise (P 6.2).
SIRSinusoidalBirth	SIR model with sinusoidal births (P 5.3).
SIRSinusoidalForcing	SIR model with sinusoidal forcing (P 5.1).
SIRTauLeap	SIR model with tau leap method (P 6.5).
SIRTermTimeForcing	SIR model with corrected term-time forcing (P 5.2).
SIRVector	SIR model for mosquito vectors (P 4.4).
SIS	Simple SIS model (P 2.5).
SIS2RiskGroups	SIS model with 2 risk groups (P 3.1).
SISDemogStoch	SIS model with demographic stochasticity (P 6.3).
SISinusoidalTransmBrith	Rabbit Hemorrhagic Disease model with sinusoidal transmission rate and per capita birth rate (P 5.4).
SISnRiskGroups	SIS model with multiple risk groups (P 3.2).
SISPairwiseApprox	Pairwise SIS approximation model (P 7.8).