env.matrices {EnvNJ}

Environment Matrices

Description

Provides the frequencies of each amino acid within the environment.

Usage

env.matrices(env)

Arguments

env

a character string vector containing the environments.

Value

Returns a list of two dataframes. The first, shown the environment in matrix form. The second provides the frequencies of each amino acid within the environments.

References

Aledo et al. Sci Rep. 2015; 5: 16955. (PMID: 26597773)

See Also

env.extract(), otu.vector()

Examples

env.matrices(c('ANQRmCTPQ', 'LYPPmQTPC', 'XXGSmSGXX'))