Exponential Random Partition Models
![[R logo]](../../../doc/html/Rlogo.svg)
![[Up]](../../../doc/html/left.jpg)
![[Top]](../../../doc/html/up.jpg)
Documentation for package ‘ERPM’ version 0.2.0
Help Pages
| Bell_constraints | Function to calculate the number of partitions with groups of sizes between smin and smax |
| calculate_denominator_Dirichlet_restricted | Calculate Dirichlet denominator |
| calculate_proba_Dirichlet_restricted | Calculate Dirichlet probability |
| check_sizes | Function to determine whether a partition contains the allowed group sizes |
| computeStatistics | Compute Statistics |
| computeStatistics_multiple | Compute Statistics multiple |
| compute_averagesize | Compute the average size of a random partition |
| compute_numgroups_denominator | Compute denominator for model with number of groups |
| correlation_between | Between groups correlation |
| correlation_within | Within groups correlation |
| correlation_with_size | Correlation with size |
| count_classes | Function to count the number of partitions with a certain group size structure, for all possible group size structure. Function to use after calling the "find_all_partitions" function. |
| CUP | CUP |
| draw_Metropolis_multiple | Draw Metropolis multiple |
| draw_Metropolis_single | Draw Metropolis single |
| estimate_ERPM | Estimate ERPM |
| estimate_logL | Estimate log likelihood |
| estimate_multipleERPM | Estimate ERPM for multiple observations |
| estimation | Exemplary outcome objects for the ERPM Package |
| exactestimates_numgroups | Exact estimates number of groups |
| find_all_partitions | Function to enumerate all possible partitions for a given n |
| gridsearch_burninthining_multiple | Grid - search burnin thining multiple |
| gridsearch_burninthining_single | Grid - search burnin thining single |
| gridsearch_burnin_single | Grid - search burnin single |
| gridsearch_thining_single | Grid - search thining single |
| group_size | Statistics on the size of groups in a partition |
| icc | Intra class correlation |
| number_categories | Number of individuals having an attribute |
| number_ties | Same pairs of individuals in a partition |
| order_groupids | Function to replace the ids of the group without forgetting an id and put in the first appearance order for example: [2 1 1 4 2] becomes [1 2 2 3 1] |
| outcomeObjects | Exemplary outcome objects for the ERPM Package |
| phase1 | Core function for Phase 1 |
| plot_averagesizes | Plot average sizes |
| plot_numgroups_likelihood | Plot likelihood of number groups |
| plot_partition | Visualization of partition |
| print.results.bayesian.erpm | Print results of bayesian estimation (beta version) |
| print.results.list.erpm | Print estimation results |
| print.results.p3.erpm | Print results of estimation of phase 3 |
| proportion_isolate | Proportion of isolates |
| range_attribute | Range of attribute in groups |
| run_phase1_multiple | Phase 1 wrapper for multiple observations |
| run_phase1_single | Phase 1 wrapper for single observation |
| run_phase2_multiple | Phase 2 wrapper for multiple observation |
| run_phase2_single | Phase 2 wrapper for single observation |
| run_phase3_multiple | Phase 3 wrapper for multiple observation |
| run_phase3_single | Phase 3 wrapper for single observation |
| same_pairs | Same pairs of individuals in a partition |
| similar_pairs | Similar pairs of individuals in a partition |
| simulate_burninthining_multiple | Simulate burnin thining multiple |
| simulate_burninthining_single | Simulate burnin thining single |
| simulate_burnin_single | Simulate burn in single |
| simulate_thining_single | Simulate thining single |
| Stirling2_constraints | Function to calculate the number of partitions with k groups of sizes between smin and smax |