cluster_genes {EMMIXgene} | R Documentation |
Clusters genes using mixtures of normal distributions
Description
Sorts genes into clusters using mixtures of normal distributions with covariance matrices restricted to be multiples of the identity matrix.
Usage
cluster_genes(gen, g = NULL)
Arguments
gen |
an EMMIXgene object produced by select_genes(). |
g |
The desired number of gene clusters. If not specified will be selected automatically on the basis of BIC. |
Value
An array containing the clustering.
Examples
#only run on first 100 genes for speed
alon_sel <- select_genes(alon_data[seq_len(100), ])
alon_clust<- cluster_genes(alon_sel , 2)
[Package EMMIXgene version 0.1.4 Index]