EMMIXgene {EMMIXgene}

EMMIXgene:

Description

Selects genes using the EMMIXgene algorithm, following the methodology of G. J. McLachlan, R. W. Bean, D. Peel; A mixture model-based approach to the clustering of microarray expression data , Bioinformatics, Volume 18, Issue 3, 1 March 2002, Pages 413–422, https://doi.org/10.1093/bioinformatics/18.3.413

Functions

select_genes: Selects the most differentially expressed genes.

cluster_genes: Clusters the genes using a mixture model approach.

cluster_tissues: Clusters the tissues based on the differences between the tissue samples among the gene groups.

See vignette('The-EMMIXgene-Workflow') for more details.