elisa_plate-class {ELISAtools}

S4 class definition of an elisa_plate object

Description

elisa_plate define the S4 class of an elisa_plate object

Arguments

batchID

characters to specify the batch

expID

characters to specify experiment or plate ID

desc

characters for the data/experiment information

data.std

data.frame for standard curve data

data.unknown

data.frame containing data for samples with unknown concentration

normFactor

numeric the correction factor for batch effects ("S").

mdata.unknown

data.frame containing the mean ODs and concentration by sample IDs.

mdata.std

data.frame containing the mean ODs and concentrations for standard data

Details

defining the S4 class of the elisa_plate object. This is the data structure to hold the elisa_plate Data. It contains different slots for holding both standard and unknown data. It also defines the regression model and the correction parameter for the batch effects.
Note: we assume each plate has its own standard curve.

Slots

batchID

character

expID

character

data.std

data.frame

data.unknown

data.frame

normFactor

numeric

desc

character

range.ODs

numeric

mdata.unknown

data.frame

mdata.std

data.frame

See Also

nls.lm

Examples

elisa_plate();