elisa_batch {ELISAtools}

Constructor function to build an elisa_batch object

Description

S3 method as a constructor to build the S4 class object of elisa_batch elisa_batch-class

Usage

elisa_batch(
  batchID = NA_character_,
  desc = NA_character_,
  runs = list(),
  model.fit = list(),
  model.name = NA_character_,
  pars = c(-1),
  num.runs = 1,
  range.ODs = c(-1, -1),
  normFactor = NaN
)

Arguments

batchID

character string to specify a batches

desc

character string for the data/experiment information

runs

list of elisa_plates in this run. There could be one or many plates in a run.

model.fit

list intend to contain information for the fitting of nls.lm. But not using it now.

model.name

character string of either the 5pl (5-parameter) or 4pl (4-parameter) logistic function

pars

numeric the actually parameters for the fitting. for example for the 5pl model they are c(a, d,xmid, scal, g).

num.runs

numeric the number of plates in this run.

range.ODs

numeric the min and max ODs

normFactor

numeric the batch effect normalization factor ("S").

Details

S3 method as a constructor to build the S4 class object of elisa_batch elisa_batch-class. Normally this is called to build a empty object with default values and then load the elisa_run data into it

Value

an elisa_batch object

See Also

nls.lm elisa_run-class elisa_plate-class elisa_batch-class

Examples

elisa_batch();