Ensemble Gene Regulatory Network Inference


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Documentation for package ‘EGRNi’ version 0.1.6

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CRN Correlation based network
Edg2Fw To compute F score from edge scores
Edgescore Edge score obtained from 4 different methods for Ensemble Gene Regulatory Network Inference
EGRN Ensemble Gene Regulatory Network Inference
F_score To compute F score using probability value
gene_exp Gene expression data for Ensemble Gene Regulatory Network Inference
IntsctEdg2Fw To compute F score for significant edges from individual methods
PCN Principal component regression based network
PLSN Partial least square based network
pvalue Probability values for Ensemble Gene Regulatory Network Inference
RidgN Ridge regression based network
weight Weights for Ensemble Gene Regulatory Network Inference