Estuarine Bayesian Single-Station Estimation Method for Ecosystem Metabolism


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Documentation for package ‘EBASE’ version 1.0.2

Help Pages

credible_plot Plot credible intervals for a, R, and b
credible_prep Get credible intervals for a, R, b
ebase Estuarine Bayesian Single-station Estimation method for ecosystem metabolism
ebase_eqboxy Oxygen saturation
ebase_form Format ebase output
ebase_plot Plot results from EBASE
ebase_prep Prepare data for ebase
ebase_rho Seawater density calculation
ebase_schmidt Schmidt number calculation
exdat Sample data from Apalachicola NERRS
exres Example results for four days from Apalachicola NERRS
fit_plot Plot observed and modeled dissolved oxygen
interp_plot Create a diagnostic plot showing interpolated values prior to metabolism estimates
metab_update Update metabolism jags fit
prior_plot Plot prior distributions for a, R, and b