calcDyspiaStat |
calcDyspiaStat: Calculates DysPIA statistics |
calcDyspiaStatCumulative |
Calculates DysPIA statistic values for all the prefixes of a gene pair set |
calcDyspiaStatCumulativeBatch |
Calculates DysPIA statistic values for the gene pair sets |
calEdgeCorScore_ESEA |
calEdgeCorScore_ESE |
class.labels_p53 |
Example vector of category labels. |
DysGPS |
DysGPS: Calculates Dysregulated gene pair score (DysGPS) for each gene pair |
DysGPS_p53 |
Example vector of DysGPS in p53 data. |
DysPIA |
DysPIA: Dysregulated Pathway Identification Analysis |
DyspiaRes_p53 |
Example list of DysPIA result in p53 data. |
DyspiaSig |
DyspiaSig |
DyspiaSimpleImpl |
DyspiaSimpleImpl |
gene_expression_p53 |
Example matrix of gene expression value. |
sample_background |
Example list of gene pair background. |
setUpBPPARAM |
setUpBPPARAM |