responseplot.abund {DiversityOccupancy} R Documentation

## plot the response of an abundance model to the change of aparticular variable

### Description

This function takes a diversityoccupancy object and one of the variables used to predict abundance, and makes a plot showing the response of occupancyt against the selected variable. This function automatically limits the values of that variable to the maximum and minimum values of the dataset.

### Usage

responseplot.abund(batch, spp, variable)


### Arguments

 batch A result from the diversityoccu function. spp The species number of which response is going to be ploted. variable The variable of which the response is to be ploted.

### Value

a ggplot object plotting the alpha diversity response to the selected variable.

### Author(s)

Derek Corcoran <derek.corcoran.barrios@gmail.com>

batchoccu

### Examples

## Not run:
data("IslandBirds")
data("Daily_Cov")
data("siteCov")

#Model the abundance for 5 bird species and calculate alpha diversity from that

BirdDiversity <-diversityoccu(pres = IslandBirds, sitecov = siteCov,
obscov = Daily_Cov,spp = 5, form = ~ Day + Wind + Time + Rain +
Noise ~ Elev + AgroFo + SecVec + Wetland + Upland)

#plot the response of abundance to individual variables for species 4, 11

responseplot.abund(batch = BirdDiversity, spp = 4, variable = Elev)

responseplot.abund(batch = BirdDiversity, spp = 11, variable = Elev)

## End(Not run)


[Package DiversityOccupancy version 1.0.6 Index]