Building Diversity Models from Multiple Species Occupancy Models


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Documentation for package ‘DiversityOccupancy’ version 1.0.6

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batchoccu Fits occupancy models for multiple species detection history
batchoccuavg Fits occupancy models for multiple species detection history and calculated model average
Birdstack Raster Stack with five variables measured in Pohnpei Island in Micronesia
Daily_Cov Seven covariables measured at 120 survey stations in an island in micronesia
diversity.predict Makes a spacially explicit prediction of the occupancy of multiple species and alpha diversity, and select the area where
diversityoccu Calculates alpha diversity from multiple species occupancy data
IslandBirds Occupancy data of 5 bird species in Micronesia.
model.diversity Find the best GLM model explaining the alpha divesity of the species
occupancy.predict Predicts occupancy for all the species in a batchoccupancy class object
responseplot.abund plot the response of an abundance model to the change of aparticular variable
responseplot.diver plot the response of the calculated alpha diversity to the change of a particular variable
responseplot.occu plot the response of an occupancy model to the change of aparticular variable
siteCov Nine covariables measured at 120 survey stations in an island in micronesia