Building Diversity Models from Multiple Species Occupancy Models

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Documentation for package ‘DiversityOccupancy’ version 1.0.6

• DESCRIPTION file.
• User guides, package vignettes and other documentation.

Help Pages

batchoccu	Fits occupancy models for multiple species detection history
batchoccuavg	Fits occupancy models for multiple species detection history and calculated model average
Birdstack	Raster Stack with five variables measured in Pohnpei Island in Micronesia
Daily_Cov	Seven covariables measured at 120 survey stations in an island in micronesia
diversity.predict	Makes a spacially explicit prediction of the occupancy of multiple species and alpha diversity, and select the area where
diversityoccu	Calculates alpha diversity from multiple species occupancy data
IslandBirds	Occupancy data of 5 bird species in Micronesia.
model.diversity	Find the best GLM model explaining the alpha divesity of the species
occupancy.predict	Predicts occupancy for all the species in a batchoccupancy class object
responseplot.abund	plot the response of an abundance model to the change of aparticular variable
responseplot.diver	plot the response of the calculated alpha diversity to the change of a particular variable
responseplot.occu	plot the response of an occupancy model to the change of aparticular variable
siteCov	Nine covariables measured at 120 survey stations in an island in micronesia