suggestColors {DepLogo} | R Documentation |
Suggests colors for symbols
Description
Suggests colors for the symbols in data
based on the co-occurrence of
symbols at common positions, weighted by the dependency values at those positions.
The idea is to assign similar colors only to symbols that either mostly occur at
different positions or that are present at positions with low inter-dependencies
to other positions.
Usage
suggestColors(data)
## S3 method for class 'DLData'
suggestColors(data)
Arguments
data |
the data |
Value
the colors
Author(s)
Jan Grau <grau@informatik.uni-halle.de>
See Also
Examples
# read data and create DLData object
seqs <- read.table(system.file("extdata", "cjun.txt", package = "DepLogo"),
stringsAsFactors = FALSE)
data <- DLData(sequences = seqs[, 1] ,weights = log1p(seqs[, 2]) )
suggestColors(data)
[Package DepLogo version 1.2.1 Index]