trimData {DWLS} | R Documentation |
trimData
Description
This function trims bulk and single-cell data to contain the same genes. The result is a list of the intersecting genes within the two datasets.
Usage
trimData(Signature_Matrix, bulkdata)
Arguments
Signature_Matrix |
A single-cell signature matrix |
bulkdata |
A bulk dataset |
Value
A list of trimmed bulk and single-cell data.
Examples
#Sig
#url <- "https://github.com/sistia01/DWLS/raw/main/inst/extdata/Sig.RData"
#dest <- "data/Sig.RData"
#download.file(url, dest)
#load("data/Sig.RData")
load(system.file("extdata", "Sig.RData", package = "DWLS"))
#dataBulk
#url <- "https://github.com/sistia01/DWLS/raw/main/inst/extdata/dataBulk.RData"
#dest <- "data/dataBulk.RData"
#download.file(url, dest)
#load("data/dataBulk.RData")
load(system.file("extdata", "dataBulk.RData", package = "DWLS"))
trimData(Signature_Matrix = Sig, bulkdata = dataBulk)
[Package DWLS version 0.1.0 Index]