dsaidemenu |
The main menu for the DSAIDE package |
flu1918data |
1918 Influenza mortality data |
generate_documentation |
A helper function which processes and displays the documentation part for each app |
generate_fctcall |
A helper function that produces a call to a simulator function for specific settings |
generate_ggplot |
A helper function that takes simulation results and produces ggplot plots |
generate_plotly |
A helper function that takes simulation results and produces plotly plots |
generate_shinyinput |
A helper function that takes a model and generates shiny UI elements |
generate_text |
A helper function that takes result from the simulators and produces text output |
norodata |
Cases of norovirus during an outbreak |
run_model |
A function that runs an app for specific settings and processes results for plot and text generation |
simulate_Characteristics_of_ID_ode |
Characteristics of ID |
simulate_Complex_ID_Control_ode |
Complex ID Control |
simulate_directtransmission_ode |
Simulation of a compartmental infectious disease transmission model illustrating different types of direct transmission |
simulate_Drug_Resistance_Evolution_stochastic |
Drug Resistance Evolution |
simulate_Environmental_Transmission_model_ode |
Environmental Transmission model |
simulate_flu_fit |
Fitting a SIR-type model to flu data |
simulate_Host_Heterogeneity_Model_ode |
Host Heterogeneity Model |
simulate_idcontrolmultigroup_ode |
Simulation of a compartmental infectious disease transmission model with 3 types of hosts and intervention |
simulate_idcontrolmultioutbreak_ode |
Simulation of a compartmental infectious disease transmission model to study the reproductive number |
simulate_idpatterns_ode |
Simulation of a compartmental infectious disease transmission model including seasonality |
simulate_idsurveillance_ode |
Simulation of a compartmental infectious disease transmission model illustrating the impact of ID surveillance |
simulate_idvaccine_ode |
Simulation of a compartmental infectious disease transmission model to study the reproductive number |
simulate_multipathogen_ode |
Simulation of a compartmental infectious disease transmission model with 2 types of pathogens |
simulate_noro_fit |
Fitting a simple SIR type model to norovirus outbreak data |
simulate_SEIRSd_model_stochastic |
SEIRSd model |
simulate_SIRSd_model_ode |
SIRSd model |
simulate_SIRSd_model_stochastic |
SIRSd model |
simulate_SIR_modelexploration |
Simulation to illustrate parameter scan of the basic SIR model with births and deaths #' |
simulate_SIR_model_discrete |
SIR model |
simulate_SIR_model_ode |
SIR model |
simulate_SIR_usanalysis |
Simulation to illustrate uncertainty and sensitivity analysis |
simulate_Vector_transmission_model_ode |
Vector transmission model |