PPI {DIscBIO}

Defining protein-protein interactions (PPI) over a list of genes,

Description

This function uses STRING-api. The outcome of STRING analysis will be stored in comma-separated values files.

Usage

PPI(data, FileName = NULL, species = "9606")

Arguments

data

A gene list.

FileName

A string vector showing the name to be used to save the resulted table. If null, no file will be exported

species

The taxonomy name/id. Default is "9606" for Homo sapiens.

Value

Either CSV files stored in the user's file system and its corresponding 'data.frame' object in R or and R object containing that information.