plotSimulation {DIRECT}

Plotting Data Simulated Under A Random-Effects Mixture Model

Description

Function plotSimulation displays sample means of data simulated under a random-effects mixture model. Each plot corresponds to a cluster. May need to partition the plotting area to display all in one plot.

Usage

plotSimulation(simudata, times = 1:ntime, nsize, 
    ntime = length(times), nrep, skip = 0, ...)

Arguments

simudata

List produced by simuDataREM. Contains simulated data.

times

Vector of length ntime indicating at which time points data are simulated.

nsize

An integer vector containing sizes of simulated clusters.

ntime

Number of time points.

nrep

Number of replicates.

skip

Not for use.

...

Addition arguments for plot.

Value

None.

Author(s)

Audrey Q. Fu

References

Fu, A. Q., Russell, S., Bray, S. and Tavare, S. (2013) Bayesian clustering of replicated time-course gene expression data with weak signals. The Annals of Applied Statistics. 7(3) 1334-1361.

See Also

simuDataREM for simulating data.

outputData for writing simulated data and parameter values used in simulation into external files.

DIRECT for clustering the data.

Examples

## See example for simuDataREM.