DGEobj.utils-package {DGEobj.utils}

DGEobj.utils Package Overview

Description

This package implements a set of utility functions to enable a limma/voom workflow capturing the results in DGEobj data structure. Aside from implementing a well developed and popular workflow in DGEobj format, the run* functions in the package illustrate how to wrap the individual processing steps in a workflow in functions that capture important metadata, processing parameters, and intermediate data items in the DGEobj data structure. This function- based approach to utilizing the DGEobj data structure insures consistency among a collection of projects processed by these methods and thus facilitates downstream automated meta-analysis.

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browseVignettes(package = 'DGEobj.utils')