process_sequence,phyDat-method {DCLEAR}

Process sequences

Description

Process sequences

Usage

## S4 method for signature 'phyDat'
process_sequence(
  x,
  division = 16L,
  dropout_character = "*",
  default_character = "0",
  deletion_character = "-"
)

Arguments

x

input data in phyDat format

division

cell division

dropout_character

Dropout character (default: '*')

default_character

Default character (default: '0')

deletion_character

Deletion character (default: '-')

Value

a 'lineage_tree_config' object

Author(s)

Wuming Gong ([e-mail])