dist_kmer_replacement_inference {DCLEAR}R Documentation

Core function of computing kmer replacement distance

Description

Compute the sequence distance matrix using inferred kmer replacement matrix

Usage

dist_kmer_replacement_inference(x, kmer_summary, k = 2)

Arguments

x

input data in phyDat format

kmer_summary

a kmer_summary object

k

k-mers (default k=2)

Value

a dist object

Author(s)

Wuming Gong (gongx030@umn.edu)


[Package DCLEAR version 1.0.13 Index]