DBGSA-package {DBGSA}R Documentation

methods of distance-based gene set functional enrichment analysis


DBGSA package provides a new method to evaluate the possiblities of the enrichment between different phenotypes. DBGSA is a novel distance-based gene set enrichment analysis method. We consider that, the distance between 2 groups with different phenotype by focusing on the gene expression should be larger, if a certain gene functional set was significantly associated with a particular phenotype.


Package: DBGSA
Type: Package
Version: 1.1
Depends: R(>=2.12.2),methods,fdrtool
Suggest: ALL
Date: 2011-05-17
License: GPL-3
LazyLoad: yes
BiocViews: bioinformatics


Li Jin, Huang Meilin Maintainer:Li Jin<lijin@hrbmu.edu.cn>


Lu Tian, Steven A. Greenberg, Sek Won Kong, Josiah Altschuler,Discovering statistically significant pathways in expression profiling studies, PNAS 2005 102;13544-13549

[Package DBGSA version 1.2 Index]