get_sse_tip_states {DAISIEprep} | R Documentation |
Extract tip states from a phylod object
Description
Extract tip states from a phylod object
Usage
get_sse_tip_states(phylod, sse_model = "musse")
Arguments
phylod |
A |
sse_model |
either "musse" (default) or "geosse". MuSSE expects state values 1, 2, 3, which here we encode as "not_present", "endemic", "nonendemic", respectively. GeoSSE expects trait values 0, 1, 2, with 0 the widespread state (here, "nonendemic"), and 1 and 2 are "not_present" and "endemic", respectively. |
Value
an integer vector of tip states, as expected by SSE models
[Package DAISIEprep version 0.4.0 Index]