as_daisie_datatable {DAISIEprep} | R Documentation |
Converts the Island_tbl
class to a data frame in the format of a DAISIE
data table (see DAISIE R package for details). This can then be input into
DAISIEprep::create_daisie_data()
function which creates the list input into
the DAISIE ML models.
Description
Converts the Island_tbl
class to a data frame in the format of a DAISIE
data table (see DAISIE R package for details). This can then be input into
DAISIEprep::create_daisie_data()
function which creates the list input into
the DAISIE ML models.
Usage
as_daisie_datatable(island_tbl, island_age, precise_col_time = TRUE)
Arguments
island_tbl |
An instance of the |
island_age |
Age of the island in appropriate units. |
precise_col_time |
Boolean, TRUE uses the precise times of colonisation, FALSE makes every colonist a max age colonistion and uses minimum age of colonisation if available. |
Value
A data frame in the format of a DAISIE data table
Author(s)
Joshua W. Lambert, Pedro Neves
Examples
phylod <- create_test_phylod(10)
island_tbl <- extract_island_species(
phylod = phylod,
extraction_method = "asr"
)
# Example where precise colonisation times are known
daisie_datatable <- as_daisie_datatable(
island_tbl = island_tbl,
island_age = 0.2,
precise_col_time = TRUE
)
# Example where colonisation times are uncertain and set to max ages
daisie_datatable <- as_daisie_datatable(
island_tbl = island_tbl,
island_age = 0.2,
precise_col_time = FALSE
)
[Package DAISIEprep version 0.4.0 Index]