DAISIE_plot_age_diversity {DAISIE} | R Documentation |
Plot clade age against clade diversity.
Description
Plots clade age against clade diversity for all clades for which colonisation time is known.
Usage
DAISIE_plot_age_diversity(
island,
title = "Clade age vs clade diversity",
island_age = NA
)
Arguments
island |
Island data object. Can be in DAISIE list format (see Galapagos_datalist and DAISIE_data_prep for examples) or in table format (see Galapagos_datatable for an example). |
title |
Title of the plot |
island_age |
Age of island in appropriate units. In
|
Details
R plot showing for each clade in the island object the time of colonisation and the diversity of the clade. Only clades for which colonisation time is known are plotted. Blue - endemic; black - non-endemic. C = number of independent colonisations on island, N = number of species on the island
Value
R plot.
Author(s)
Luis Valente
References
Valente, L.M., A.B. Phillimore and R.S. Etienne (2015). Equilibrium and non-equilibrium dynamics simultaneously operate in the Galapagos islands. Ecology Letters 18: 844-852.
See Also
DAISIE_sim_cr
,
DAISIE_sim_time_dep
,
DAISIE_sim_cr_shift
,
DAISIE_plot_island
Examples
### Plot Galapagos age-diversity for Galapagos dataset
utils::data(Galapagos_datalist)
DAISIE_plot_age_diversity(Galapagos_datalist)