refseq {CovidMutations}

SARS-Cov-2 genomic reference sequence from NCBI

Description

This reference sequence is derived from "fasta" file, preprocessed by "read.fasta" function(refseq<-read.fasta("NC_045512.2.fa",forceDNAtolower=FALSE)[[1]]). It is used for annotating mutations in virus samples.

Usage

data(refseq)

Format

"SeqFastadna" characters.

Source

https://pubmed.ncbi.nlm.nih.gov/32015508/

Examples

data(refseq)