get_diff_ratio_net {Corbi} | R Documentation |
Construct differential expression ratio network
Description
Construct the differential expression ratio network for a single sample.
Usage
get_diff_ratio_net(
ref.ratio.dist,
expr.val,
log.expr = FALSE,
scale.degree = FALSE
)
Arguments
ref.ratio.dist |
The expression ratio distribution profile returned by |
expr.val |
Numeric vector of gene expression values in the sample. |
log.expr |
Logical variable indicating whether the input expression vector is in logarithmic scale. |
scale.degree |
Logical variable indicating whether the degree values are scaled according to the dropout rate. |
Value
This function will return a list with the following components:
net |
The binary adjacent matrix of differential expression ratio network. |
diff |
A numeric vector containing the adjusted degree differences of all genes. |
degree |
A list containing the raw degree differences and sums of all genes. |
[Package Corbi version 0.6-2 Index]