prob.marked {ConnMatTools} | R Documentation |
This function returns the probability each of a set of observations corresponds to a marked individual given the distribution of scores for unmarked and marked individuals and the fraction of individuals that are marked.
prob.marked(obs, d.unmarked, d.marked, phi = 0.5, p = 1)
obs |
A vector of score values for a random sample of (marked and unmarked) individuals from the population |
d.unmarked |
A function representing the PDF of unmarked individuals. Must be normalized so that it integrates to 1 for the function to work properly. |
d.marked |
A function representing the PDF of marked individuals. Must be normalized so that it integrates to 1 for the function to work properly. |
phi |
The fraction of settlers at the destination population that originated at the source population. Defaults to 0.5, which would correspond to an even sample of marked and unmarked individuals. |
p |
Fraction of individuals (i.e., eggs) marked in the source population. Defaults to 1. |
A vector of the same size as obs
containing the probability
that each individual is marked
David M. Kaplan dmkaplan2000@gmail.com
Kaplan DM, Cuif M, Fauvelot C, Vigliola L, Nguyen-Huu T, Tiavouane J and Lett C (in press) Uncertainty in empirical estimates of marine larval connectivity. ICES Journal of Marine Science. doi:10.1093/icesjms/fsw182.
See also d.rel.conn.dists.func
,
optim.rel.conn.dists
.