plot.GIC.compCL {Compack}R Documentation

Plot the GIC curve produced by "GIC.compCL" object.

Description

Plot the CIC curve as a function of the lam values.

Usage

## S3 method for class 'GIC.compCL'
plot(x, xlab = c("log", "-log", "lambda"), ...)

Arguments

x

fitted "GIC.compCL" object.

xlab

what is on the X-axis, "log" plots against log(lambda) (default), "-log" against -log(lambda), and "lambda" against lambda.

...

other graphical parameters.

Details

A GIC curve is produced.

Value

No return value. Side effect is a base R plot.

Author(s)

Zhe Sun and Kun Chen

References

Lin, W., Shi, P., Peng, R. and Li, H. (2014) Variable selection in regression with compositional covariates, https://academic.oup.com/biomet/article/101/4/785/1775476. Biometrika 101 785-979.

See Also

GIC.compCL and compCL, and predict and coef methods for "GIC.compCL" object.

Examples

p = 30
n = 50
beta = c(1, -0.8, 0.6, 0, 0, -1.5, -0.5, 1.2)
beta = c(beta, rep(0, times = p - length(beta)))
Comp_data = comp_Model(n = n, p = p, beta = beta, intercept = FALSE)
GICm1 <- GIC.compCL(y = Comp_data$y, Z = Comp_data$X.comp,
                    Zc = Comp_data$Zc, intercept = Comp_data$intercept)
plot(GICm1)
plot(GICm1, xlab = "-log")


[Package Compack version 0.1.0 Index]