Summarise and Visualise Characteristics of Patients in the OMOP CDM


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Documentation for package ‘CohortCharacteristics’ version 0.2.0

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mockCohortCharacteristics It creates a mock database for testing PatientProfiles package
optionsTableCharacteristics Additional arguments for the function tableCharacteristics.
optionsTableCohortOverlap Additional arguments for the function tableCohortOverlap.
optionsTableCohortTiming Additional arguments for the function tableCohortTiming.
plotCharacteristics Create a ggplot from the output of summariseCharacteristics. 'r lifecycle::badge("experimental")'
plotCohortAttrition create a ggplot from the output of summariseLargeScaleCharacteristics.
plotCohortOverlap Plot the result of summariseCohortOverlap.
plotCohortTiming Plot summariseCohortTiming results.
plotComparedLargeScaleCharacteristics create a ggplot from the output of summariseLargeScaleCharacteristics.
plotLargeScaleCharacteristics create a ggplot from the output of summariseLargeScaleCharacteristics.
summariseCharacteristics Summarise characteristics of cohorts in a cohort table
summariseCohortAttrition Summarise attrition associated with cohorts in a cohort table
summariseCohortCount Summarise counts for cohorts in a cohort table
summariseCohortOverlap Summarise overlap between cohorts in a cohort table
summariseCohortTiming Summarise timing between entries into cohorts in a cohort table
summariseLargeScaleCharacteristics This function is used to summarise the large scale characteristics of a cohort table
tableCharacteristics Format a summarised_characteristics object into a visual table.
tableCohortAttrition Create a visual table from the output of summariseCohortAttrition. 'r lifecycle::badge("experimental")'
tableCohortCount Format a summarised_characteristics object into a visual table.
tableCohortOverlap Format a summariseOverlapCohort result into a visual table.
tableCohortTiming Format a summariseCohortTiming result into a visual table.
tableLargeScaleCharacteristics Format a summarised_large_scale_characteristics object into a visual table.