Seeking and Finding Clones in Copy Number and Sequencing Data

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Documentation for package ‘CloneSeeker’ version 1.0.11

• DESCRIPTION file.
• User guides, package vignettes and other documentation.

Help Pages

coerce-method	Class "WeightVector"
coerce-method	Class "Tumor"
dataGen	Simulating Tumor Clones
generateSimplex	Simplices and Clonal Fractions
generateTumorData	Simulating Tumor Clones
getClone	Class "Tumor"
plotTumorData	Simulating Tumor Clones
runAlg	Seeking Tumor Clones From Data
sampleSimplex	Simplices and Clonal Fractions
seekClones	Seeking Tumor Clones From Data
Simplices	Simplices and Clonal Fractions
summary-method	Class "Tumor"
Tumor	Class "Tumor"
Tumor-class	Class "Tumor"
tumorGen	Simulating Tumor Clones
WeightVector	Class "WeightVector"
WeightVector-class	Class "WeightVector"