TwoPrimerRemove {CleanBSequences}R Documentation

Clean biological secuences of two primers

Description

Clean biological sequences of two restriction enzyme primers or cloning vectors.

Usage

TwoPrimerRemove(SEQs, PrimerF, PrimerR)

Arguments

SEQs

file with fasta format containing biological sequences that are to be cleaned.

PrimerF

dnastring or file with fasta format containing the foward primer/vector sequences to be removed.

PrimerR

dnastring or file with fasta format containing the reverse primer/vector sequences to be removed.

Value

clean biological sequences

Author(s)

Florencia I Pozzi, Gisela Y. Green, Ivana G. Barbona, Gustavo R. Rodriguez, Silvina A. Felitti

Examples

SEQ1 = DNAString("AATCG")
SEQ2 = DNAString("TT")
SEQ3 = DNAString("CG")
TwoPrimerRemove (SEQ1,SEQ2,SEQ3)

[Package CleanBSequences version 0.4.0 Index]