sortcna {Canopy}

To sort identified overlapping CNAs.

Description

To sort identified overlapping CNAs by their major and minor copy numbers. Used in canopy.post.

Usage

sortcna(tree,C)

Arguments

tree

input tree

C

CNA and CNA-region overlapping matrix

Value

Tree whose overlapping CNAs are sorted by major and minor copy numbers.

Author(s)

Yuchao Jiang [e-mail]

Examples

data(MDA231_tree)
data(MDA231)
C = MDA231$C
sortcna(MDA231_tree, C)