Hamming is computing the co-occurrence matrix.
is matrix with the result-retaining of MCMC.
Hamming use the result-retaining of MCMC to compute the co-occurrence matrix. And we use the co-occurrence matrix to cluster which the criteria is MPEAR.
Hamming.matrix is the co-occurrence matrix and the idea is Hamming distance.
pro.matrix is the standardization of co-occurrence matrix.
data is data.frame with matrix. The purpose is constructing the heat map.
Peter Wu (firstname.lastname@example.org)