testInputBoundaries {CORE}

A table of chromosome boundary positions for DNA copy number analysis

Description

The entire length of the genome was divided into 50009 bins, with chromosomes laid out in the usual genomic order: 1,...,22,X,Y. Each observation in the table provides the start and end bin numbers of each chromosome (chrom).

Usage

data(testInputBoundaries)

Format

A data frame with 24 observations on the following 3 variables.

chrom

a numeric vector

start

a numeric vector

end

a numeric vector

References

Navin N, Kendall J, Troge J, Andrews P, Rodgers L, McIndoo J, Cook K, Stepansky A, Levy D, Esposito D et al. 2011. Tumour evolution inferred by single-cell sequencing. Nature 472(7341): 90-U119.

Examples

data(testInputBoundaries)
## maybe str(testInputBoundaries) ; plot(testInputBoundaries) ...