cjamp |
C-JAMP: Copula-based joint analysis of multiple phenotypes. |
cjamp_loop |
C-JAMP: Copula-based joint analysis of multiple phenotypes. |
compute_expl_var |
Phenotypic variance explained by genetic variants. |
compute_MAF |
Compute minor allele frequency of genetic variants. |
generate_clayton_copula |
Generate data from the Clayton copula. |
generate_doubleton_data |
Functions to generate genetic data. |
generate_genodata |
Functions to generate genetic data. |
generate_phenodata |
Functions to generate phenotype data. |
generate_phenodata_1 |
Functions to generate phenotype data. |
generate_phenodata_1_simple |
Functions to generate phenotype data. |
generate_phenodata_2_bvn |
Functions to generate phenotype data. |
generate_phenodata_2_copula |
Functions to generate phenotype data. |
generate_singleton_data |
Functions to generate genetic data. |
get_estimates_naive |
Naive estimates of the copula and marginal parameters. |
lrt |
Compute likelihood ratio tests. |
lrt_copula |
Compute likelihood ratio tests. |
lrt_param |
Compute likelihood ratio tests. |
minusloglik |
Minus log-likelihood of copula models. |
summary.cjamp |
Summary function. |