CITMIC {CITMIC}

CITMIC

Description

The function "CITMIC" is used to identify cell infiltration in tumor microenvironment by calculating intercellular crosstalk.

Usage

CITMIC(GEP, damping=0.90)

Arguments

GEP

An example gene expression profile

damping

Restart the probability of the random-walk algorithm (default: 0.9).

Value

cell infiltration score

Examples

# Obtain the example data
GEP<-GetData_CITMIC("GEP")
# Run the function
lnScore<-CITMIC(GEP, damping=0.90)