Calculate Chromosomal Instability Metrics
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Documentation for package ‘CINmetrics’ version 0.1.0
Help Pages
| CINmetrics | CINmetrics |
| cna | Copy Number Aberration |
| countingBaseSegments | countingBaseSegments |
| countingBreakPoints | countingBreakPoints |
| fga | Fraction Genome Altered |
| maskCNV_BRCA | Breast Cancer Data from TCGA Data Release 25.0 GDC Product: Data Release Date: July 22, 2020 Masked Copy Number variation data for Breast Cancer for 10 unique samples selected randomly from TCGA |
| tai | Total Aberration Index |
| taiModified | Modified Total Aberration Index |