plot_heatmap_marker {CIARA}

plot_heatmap_marker

Description

plot_heatmap_marker

Usage

plot_heatmap_marker(
  marker_top,
  marker_all_cluster,
  cluster,
  condition,
  norm_counts,
  text_size
)

Arguments

marker_top

First element returned by markers_cluster_seurat

marker_all_cluster

Second element returned by markers_cluster_seurat

cluster

Vector of length equal to the number of cells, with cluster assignment.

condition

Vector or length equal to the number of cells, specifying the condition of the cells (i.e. batch, dataset of origin..)

norm_counts

Norm count matrix (genes X cells).

text_size

Size of the text in the heatmap plot.

Value

Heatmap class object.

Author(s)

Gabriele Lubatti [e-mail]

See Also

https://www.rdocumentation.org/packages/ComplexHeatmap/versions/1.10.2/topics/Heatmap