BP_GetFittedParameters {BoneProfileR}R Documentation

Return the fitted parameters

Description

Return the fitted parameters.

Usage

BP_GetFittedParameters(bone, analysis = 1, alloptim = FALSE)

Arguments

bone

The bone image to be used

analysis

Name or rank of analysis

alloptim

If TRUE, return the complete object returned by optim

Details

BP_GetFittedParameters returns the fitted parameters

Value

The fitted parameters

Author(s)

Marc Girondot marc.girondot@gmail.com

See Also

Other BoneProfileR: BP_AutoFit(), BP_ChooseBackground(), BP_ChooseCenter(), BP_ChooseForeground(), BP_DetectBackground(), BP_DetectCenters(), BP_DetectForeground(), BP_DuplicateAnalysis(), BP_EstimateCompactness(), BP_FitBayesianCompactness(), BP_FitMLCompactness(), BP_FitMLRadialCompactness(), BP_ListAnalyses(), BP_LnLCompactness(), BP_OpenImage(), BP_Report(), Erinaceus_europaeus, plot.BoneProfileR(), summary.BoneProfileR()

Examples

## Not run: 
# Not run:
library(BoneProfileR)
path_Hedgehog <- system.file("extdata", "Erinaceus_europaeus_fem_2-1_small.png", 
                             package = "BoneProfileR")
 bone <- BP_OpenImage(file=path_Hedgehog)
 bone <- BP_DetectBackground(bone=bone, analysis="logistic")
 bone <- BP_DetectForeground(bone=bone, analysis="logistic")
 bone <- BP_DetectCenters(bone=bone, analysis="logistic")
 bone <- BP_EstimateCompactness(bone, analysis="logistic")
 bone <- BP_FitMLCompactness(bone, analysis="logistic")
 BP_GetFittedParameters(bone, analysis="logistic")

## End(Not run)

[Package BoneProfileR version 2.4 Index]