BP_DetectCenters {BoneProfileR}R Documentation

Detect the centers of an image

Description

Detects the centers of an image. Note that this function must not be used with partial bone section.

Usage

BP_DetectCenters(bone, analysis = 1, show.plot = TRUE)

Arguments

bone

The bone image to be used

analysis

The name or rank of analysis

show.plot

should plot is shown ?

Details

BP_DetectCenters detects the centers of an image

Value

The orignial bone object with a new attribute for centers

Author(s)

Marc Girondot marc.girondot@gmail.com

See Also

Other BoneProfileR: BP_AutoFit(), BP_ChooseBackground(), BP_ChooseCenter(), BP_ChooseForeground(), BP_DetectBackground(), BP_DetectForeground(), BP_DuplicateAnalysis(), BP_EstimateCompactness(), BP_FitBayesianCompactness(), BP_FitMLCompactness(), BP_FitMLRadialCompactness(), BP_GetFittedParameters(), BP_ListAnalyses(), BP_LnLCompactness(), BP_OpenImage(), BP_Report(), Erinaceus_europaeus, plot.BoneProfileR(), summary.BoneProfileR()

Examples

## Not run: 
# Not run:
library(BoneProfileR)
 bone <- BP_OpenImage()
 # or 
path_Hedgehog <- system.file("extdata", "Erinaceus_europaeus_fem_2-1_small.png", 
                             package = "BoneProfileR")
 bone <- BP_OpenImage(file=path_Hedgehog)
 bone <- BP_DetectBackground(bone=bone)
 bone <- BP_DetectForeground(bone=bone)
 bone <- BP_DetectCenters(bone=bone)
 plot(bone, type="mineralized", show.grid=FALSE)
 plot(bone, type="unmineralized", show.grid=FALSE)
 plot(bone, type="section", show.grid=FALSE)

## End(Not run)

[Package BoneProfileR version 2.4 Index]