testMeth {BisRNA}

Apply poisson.test to BS coverage and non-conversion ratio.

Description

testMeth applies poisson.test to a sample from bisulfite-treated RNA experiment taking into account the ratio (Poisson parameter / coverage) characteristic of this sample.

Usage

testMeth(X, lambda)

Arguments

X

A list containing coverage as 1st element and non-conversion ratio as 2nd element, for one C position.

lambda

ratio (Poisson parameter / coverage)

Details

This function takes RNA bisulfite sequencing coverage and non-conversion ratio, applies poisson.test and outputs the p-value.

Value

This function returns the p-value from poisson.test.