Identification of Impulse-Like Gene Expression Changes in Short Genomic Series Data

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Documentation for package ‘Biopeak’ version 1.0

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bgCorr Background noise correction of expression data
findClusters Identification of clusters with similar temporal regulation
findPeaks Identification of peaks in an expression signal
getCormat Identification of co-expressing genes
heat Transcriptional profiles of human epithelial cells in response to heat
maProcessing Pre-processing of microarray datasets
peakDetection Identification of biomarkers specific to distinct phases of the underlying biological process
plotExpression Plot the expression signal of individual genes
plotHeatmap Plot a heatmap for selected genes
saveOutput Save the peak detection output to a text file