trinarizeMatrix {Binarize} R Documentation

## Utility function to trinarize a matrix of measurements

### Description

Trinarizes a matrix of measurements all at once, and returns the trinarized vectors as well as the trinarization thresholds and the p-values.

### Usage

trinarizeMatrix(mat,
method = c("TASCA", "TASCB"),
...)


### Arguments

 mat A n x m matrix comprising m raw measurements of n features. method The trinarization algorithm to be used. method="TASCA" calls TASC with method="A". method="TASCB" calls TASC with method="B". adjustment Specifies an optional adjustment for multiple testing that is applied to the p-values (see p.adjust for possible values). By default, no adjustment is applied. ... Further parameters that are passed to the respective trinarization methods (TASC).

### Value

A n x (m+3) matrix of trinarized measurements. Here, the first m columns correspond to the trinarized measurements. The m+1-st and the m+2-st column comprises the trinarization thresholds for the features, and the m+3-nd column contains the p-values.

TASC, p.adjust
tri <- trinarizeMatrix(t(iris[,1:4]))