comparePredAdjMatrix2TrueAdjMat {BiCausality}

comparePredAdjMatrix2TrueAdjMat

Description

comparePredAdjMatrix2TrueAdjMat is a support function that can compare two adjacency matrices: ground-truth and inferred matrices.

Usage

comparePredAdjMatrix2TrueAdjMat(trueAdjMat, adjMat)

Arguments

trueAdjMat

a ground-truth matrix.

adjMat

an inferred matrix.

Value

This function returns a list of precision prec, recall rec, and F1 score F1 of inferred vs. groundtruth matrices.

Examples

# Generate simulation data
G<-matrix(FALSE,10,10) # groundtruth
G[1,c(4,7,8,10)]<-TRUE
G[2,c(5,7,9,10)]<-TRUE
G[3,c(6,8,9,10)]<-TRUE
comparePredAdjMatrix2TrueAdjMat(trueAdjMat=G,adjMat=G)