prob_pathogenic {BeviMed}

Calculate variant marginal probabilities of pathogencity

Description

Calls bevimed and extract_prob_pathogenic to obtain marginal probabilities of pathogenicity.

Usage

prob_pathogenic(by_model = FALSE, ...)

Arguments

by_model

Logical value determining whether to return probabilities broken down by mode of inheritance.

...

Arguments to pass to bevimed.

Value

If by_model is FALSE, a vector of probabilities of pathogenicity for each variant, otherwise a list of vectors of probabilities of pathogenicity conditional on each compared association model.

See Also

extract_prob_pathogenic, bevimed