extract_prob_pathogenic {BeviMed}

Extract variant marginal probabilities of pathogenicity

Description

Extract the marginal probability of pathogenicity for individual variants from BeviMed object, optionally broken down by mode of inheritance/model.

Usage

extract_prob_pathogenic(x, by_model = TRUE)

Arguments

x

Object of class BeviMed.

by_model

Logical value determining whether to return probabilities broken down by mode of inheritance.

Value

A vector of probabilities of pathogenicity for individual variants, or if by_model is TRUE, then a matrix of probabilities, with rows corresponding to modes of inheritance and columns to variants.

See Also

prob_pathogenic, bevimed